Solving the Mystery of Headshaking in Horses
Treat the cause now and get long term relief. Order HereIt is what it looks like—an automatic response to flies, without the flies.
Horses automatically shake their heads to throw off flies that land on their face or neck. This automatic reaction to flies, the fly defense system, is turned off when there is no threat of flies, as in the winter and in the dark. The system is turned on when there is a threat from flies, as in the summer daylight, when headshaking horses usually suffer from symptoms. This seasonal aspect to horse headshaking has led some to believe it’s related to allergies or sensitivity to sunlight, but a closer look at the fly defense system will show how it is involved in horse headshaking.
Compare the Normal Healthy Horse with the Headshaker.
The Normal Healthy Horse
In order to understand headshaking in horses, it is first necessary to understand the normal healthy horse. The horse has successfully evolved over millions of years, longer than human evolution. Horse headshaking is a common condition, increasing in prevalence throughout the world. It seems very unlikely or impossible that headshaking in horses could be caused by some unexplained recently developed neurological or eye defect. Instead, let us look at the horse and examine what mechanisms the horse, with all its power and speed, has evolved to survive so successfully.
The horse may be large, but it has a very small and lethal enemy, the fly. The horse’s principal defense against flies is movement. A horse at the gallop is not likely to be bothered by flies. Moving less quickly, or at rest, the horse has a number of movement methods for keeping flies away. Tail swishing is obvious, as is flicking the ears. The body of the horse is covered with a layer of panniculus muscles just under the skin, and these muscles react to flick away flies whenever a fly disturbs the end of the coat hairs. This reaction has to be very fast, and so messages are conveyed locally through nerve junctions in the spine. The lower legs have no panniculus muscles. A fly detected in these four areas will be removed by foot stamping.
Now we come to the interesting part. There are no panniculus muscles on the neck and head. When a fly disturbs the hairs of the neck or head, the fly is removed by headshaking. Again, this has to be rapid, before the fly can strike, and so the message is passed very quickly via the nerve junctions of the spine. If this anti-fly headshaking is observed carefully, it will be seen that it is an automatic action over which the horse, that is the brain of the horse, has no control.
All of these automatic actions have an energy cost for the horse, and so the horse has evolved to switch the whole fly defense system off when there are no flies around. How does the horse know that there are flies around? The answer is daylight and warmth. As the ambient temperature rises in the spring, the horse switches on the anti-fly reflex during the day, and off again at night.
This can be tested on a warm day by lightly brushing the hairs of the flank of the horse with the fingertips. The horse will automatically flick the panniculus muscles, seen as a ripple on the skin. If the horse is now taken into a dark barn out of the light, the whole anti-fly reflex will shut down in the absence of daylight. In a dark barn it is dangerous to imitate fly landing, or to have flies around. With the anti-fly reflex system shut down in the absence of daylight, the horse will defend itself against flies by making circular motions with the hind legs and rearing up at the front. This is why it is not a good idea to work around a horse in dark conditions.
Note that even a small shaft of daylight into the barn will tell the horse that it is day, not night, and the normal anti-fly reflex may be switched on.
So now we can see that headshaking to remove flies is automatic and will occur during the longer warmer days of the spring, summer, and early fall, but will not occur at the gallop, in the dark, or in winter. We can also now understand why some horse headshaking can be reduced by the use of head and eye masks, stopping or limiting the natural anti-fly reflex.

During the summer fly season, in daylight, the shaded areas automatically move in response to fly activation of coat hairs - by ear twitching, headshaking, tail swishing, and foot stamping. The unshaded area has panniculus muscles which are automatically activated to flick off any flies.
The Headshaking Horse
We have seen that headshaking in the normal horse is a natural defensive reaction to the presence of flies. Headshaking horses repeatedly perform the movement even though there is no current threat from flies. This is an abnormal movement and often results in the horse being unable to be used. It is usually stated that there is no cure for headshaking in horses. With our analysis of the aetiology (the underlying cause), that has all changed. We now know the cause with certainty, and correction of the condition is readily available.
Our work on horse bleeding from the lungs (exercise induced pulmonary haemorrhage) has now saved many horses from this previously incurable debilitating condition. Bleeding is very common and is due to additional high blood pressure in the horse. Horse blood pressure rises naturally for speed and acceleration, but any obstruction of circulation will further raise blood pressure until blood vessel damage occurs.
Some of this blood vessel damage occurs in the skin, at the level where both nerves and blood vessels surround the hair bulb. It is these nerves which trigger headshaking in horses, because the nerve messages from the hair bulb are those which trigger the head to shake, to throw off flies.
A horse does not normally have high blood pressure at rest, although we have seen a few rare cases. Once the horse starts to exercise, if the obstructed circulation causes pressure on the hair bulbs of the neck or head, then the head will shake. This is why in most cases, horses only headshake when they are asked for work.
The first action to be taken is to return the blood pressure to normal, whether exercising or not. After a ten-day course of Equiwinner including normal daily exercise, the circulation should be normal. This healthy circulation is necessary to end headshaking in any horse which has recently started it.
Where the horse has been headshaking for some time, perhaps for years, headshaking may have been partly alleviated by suppression of the natural reflexes with restraining tack, or with masks, drugs, herbs or other substances. In these long-term cases, more time is needed for repair of the damaged blood vessels and nerves around the hair bulbs of the head and neck. In these long-term cases, a second course of Equiwinner is recommended, combined with daily exercise and twice daily hosing with cold water over the head and neck after the horse has been warmed up with exercise. The reason for the cold water is that by good fortune, there is a small muscle attached to the hair bulb which pulls the hair upright in response to cold. By exercising this muscle, we can restore good circulation to the hair bulb and free up the nerves.
Because of the fact that domesticated horses can never get enough continuous exercise, excess blood pressure will very slowly start to rise again over a period of time. It is therefore recommended to follow up by using Equiwinner again at least once yearly to keep the circulation in good condition and to avoid any further trouble.
Click here for the latest research on idiopathic headshaking.

The skin of the head and neck of the horse is much thinner than body skin. In the head and neck, the skin components - blood vessels, nerves and sweat glands, are more tightly packed and so excess pressure can cause much greater disruption.
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